Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyHelical domain of Sec23/24 8036407 3001173 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyvWA-like 8036410 3000832 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyZn-finger domain of Sec23/24 8036412 3000837 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyC-terminal, gelsolin-like domain of Sec23/24 8036411 3000569 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyC-terminal, gelsolin-like domain of Sec23/24 8036411 3000569 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyHelical domain of Sec23/24 8036407 3001173 SCOP2B (2022-06-29)
C [auth D]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
C [auth D]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyvWA-like 8036410 3000832 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyZn-finger domain of Sec23/24 8036412 3000837 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyHelical domain of Sec23/24 8036407 3001173 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyvWA-like 8036410 3000832 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyZn-finger domain of Sec23/24 8036412 3000837 SCOP2B (2022-06-29)
F [auth G]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
F [auth G]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8036409 3001553 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyC-terminal, gelsolin-like domain of Sec23/24 8036411 3000569 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRas-like P-loop GTPases 8060249 3002022 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyRas-like P-loop GTPases 8060249 3002022 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyRas-like P-loop GTPases 8060249 3002022 SCOP2B (2022-06-29)
D [auth E]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
D [auth E]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyZn-finger domain of Sec23/24 8038541 3000837 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyvWA-like 8038533 3000832 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyHelical domain of Sec23/24 8038525 3001173 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyHelical domain of Sec23/24 8038525 3001173 SCOP2B (2022-06-29)
I [auth L]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyvWA-like 8038533 3000832 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyZn-finger domain of Sec23/24 8038541 3000837 SCOP2B (2022-06-29)
I [auth L]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyHelical domain of Sec23/24 8038525 3001173 SCOP2B (2022-06-29)
J [auth M]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B Superfamilybeta-sandwich domain of sec23/24 8038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyZn-finger domain of Sec23/24 8038541 3000837 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyvWA-like 8038533 3000832 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASec23_BSe4bziA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
ASec23_helicale4bziA5 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
AGelsoline4bziA4 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
ASec23_trunke4bziA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
Azf-Sec23_Sec24e4bziA3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)
C [auth D]Sec23_BSe4bziD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
C [auth D]Sec23_helicale4bziD4 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
C [auth D]Gelsoline4bziD2 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
C [auth D]Sec23_trunke4bziD3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
C [auth D]zf-Sec23_Sec24e4bziD5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)
F [auth G]Sec23_BSe4bziG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
F [auth G]Sec23_helicale4bziG5 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
F [auth G]Gelsoline4bziG3 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
F [auth G]Sec23_trunke4bziG4 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
F [auth G]zf-Sec23_Sec24e4bziG2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)
BRase4bziB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RasECOD (1.6)
G [auth J]Rase4bziJ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RasECOD (1.6)
H [auth K]Rase4bziK1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: RasECOD (1.6)
D [auth E]Sec23_BSe4bziE16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
D [auth E]Sec23_helicale4bziE15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
D [auth E]Gelsoline4bziE19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
D [auth E]Sec23_trunke4bziE18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
D [auth E]zf-Sec23_Sec24e4bziE17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)
I [auth L]Sec23_BSe4bziL16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
I [auth L]Sec23_helicale4bziL15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
I [auth L]Gelsoline4bziL19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
I [auth L]Sec23_trunke4bziL18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
I [auth L]zf-Sec23_Sec24e4bziL17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)
J [auth M]Sec23_BSe4bziM16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: Sec23_BSECOD (1.6)
J [auth M]Sec23_helicale4bziM15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: Sec23_helicalECOD (1.6)
J [auth M]Gelsoline4bziM19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: GelsolinECOD (1.6)
J [auth M]Sec23_trunke4bziM18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: Sec23_trunkECOD (1.6)
J [auth M]zf-Sec23_Sec24e4bziM17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: zf-Sec23_Sec24ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth D],
F [auth G]
PF04815Sec23/Sec24 helical domain (Sec23_helical)Sec23/Sec24 helical domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is composed of five alpha helices.
Domain
A,
C [auth D],
F [auth G]
PF00626Gelsolin repeat (Gelsolin)Gelsolin repeat- Domain
A,
C [auth D],
F [auth G]
PF08033Sec23/Sec24 beta-sandwich domain (Sec23_BS)Sec23/Sec24 beta-sandwich domain- Domain
A,
C [auth D],
F [auth G]
PF04811Sec23/Sec24 trunk domain (Sec23_trunk)Sec23/Sec24 trunk domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is known as the trunk domain and has an alpha/beta vWA fold and forms the dimer interface.
Domain
A,
C [auth D],
F [auth G]
PF04810Sec23/Sec24 zinc finger (zf-Sec23_Sec24)Sec23/Sec24 zinc fingerCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is found to be zinc binding domain.
Domain
D [auth E],
I [auth L],
J [auth M]
PF04815Sec23/Sec24 helical domain (Sec23_helical)Sec23/Sec24 helical domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is composed of five alpha helices.
Domain
D [auth E],
I [auth L],
J [auth M]
PF00626Gelsolin repeat (Gelsolin)Gelsolin repeat- Domain
D [auth E],
I [auth L],
J [auth M]
PF08033Sec23/Sec24 beta-sandwich domain (Sec23_BS)Sec23/Sec24 beta-sandwich domain- Domain
D [auth E],
I [auth L],
J [auth M]
PF04811Sec23/Sec24 trunk domain (Sec23_trunk)Sec23/Sec24 trunk domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is known as the trunk domain and has an alpha/beta vWA fold and forms the dimer interface.
Domain
D [auth E],
I [auth L],
J [auth M]
PF04810Sec23/Sec24 zinc finger (zf-Sec23_Sec24)Sec23/Sec24 zinc fingerCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is found to be zinc binding domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth D],
F [auth G]
SEC23P
B,
G [auth J],
H [auth K]
SAR1P
D [auth E],
I [auth L],
J [auth M]
SEC24P
E [auth F],
K [auth N],
L [auth O]
SEC24P

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
C [auth D],
F [auth G]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR006896Sec23/Sec24, trunk domainDomain
A,
C [auth D],
F [auth G]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR006900Sec23/Sec24, helical domainDomain
A,
C [auth D],
F [auth G]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
A,
C [auth D],
F [auth G]
IPR007123Gelsolin-like domainDomain
A,
C [auth D],
F [auth G]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR037550Sec23, C-terminalDomain
A,
C [auth D],
F [auth G]
IPR037364Protein transport protein Sec23Family
A,
C [auth D],
F [auth G]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR012990Sec23/Sec24 beta-sandwichDomain
B,
G [auth J],
H [auth K]
IPR005225Small GTP-binding domainDomain
B,
G [auth J],
H [auth K]
IPR006687Small GTPase superfamily, SAR1-typeFamily
B,
G [auth J],
H [auth K]
IPR006689Small GTPase superfamily, ARF/SAR typeFamily
B,
G [auth J],
H [auth K]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR006896Sec23/Sec24, trunk domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR050550SEC23/SEC24 family, SEC24 subfamilyFamily
D [auth E],
I [auth L],
J [auth M]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR006900Sec23/Sec24, helical domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR041742Sec24-like, trunk domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
D [auth E],
I [auth L],
J [auth M]
IPR007123Gelsolin-like domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR012990Sec23/Sec24 beta-sandwichDomain
E [auth F],
K [auth N],
L [auth O]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR006896Sec23/Sec24, trunk domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR050550SEC23/SEC24 family, SEC24 subfamilyFamily
E [auth F],
K [auth N],
L [auth O]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR006900Sec23/Sec24, helical domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR041742Sec24-like, trunk domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
E [auth F],
K [auth N],
L [auth O]
IPR007123Gelsolin-like domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR012990Sec23/Sec24 beta-sandwichDomain