4BMO
Crystal Structure of Bacillus cereus Ribonucleotide Reductase di- iron NrdF in Complex with NrdI (1.8 A resolution)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4bmoa_ | All alpha proteins | Ferritin-like | Ferritin-like | automated matches | automated matches | (Bacillus cereus ) [TaxId: 1396 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribonuc_red_sm | e4bmoA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
B | Flavodoxin_NdrI | e4bmoB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: Flavoproteins | F: Flavodoxin_NdrI | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (4.3.0) |
B | 3.40.50.360 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Flavodoxin domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00268 | Ribonucleotide reductase, small chain (Ribonuc_red_sm) | Ribonucleotide reductase, small chain | - | Domain | |
PF07972 | NrdI Flavodoxin like (Flavodoxin_NdrI) | NrdI Flavodoxin like | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR026494 | Ribonucleoside-diphosphate reductase subunit beta | Family | |
IPR000358 | Ribonucleotide reductase small subunit family | Family | |
IPR030475 | Ribonucleotide reductase small subunit, acitve site | Active Site | |
IPR033909 | Ribonucleotide reductase small subunit | Family | |
IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily | |
IPR029039 | Flavoprotein-like superfamily | Homologous Superfamily | |
IPR004465 | Ribonucleotide reductase Class Ib, NrdI | Family | |
IPR020852 | Ribonucleotide reductase, class Ib, NrdI, bacterial | Family |