4BHX
Crystal structure of the SCAN domain from human paternally expressed gene 3 protein
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4bhxa1 | All alpha proteins | Acyl carrier protein-like | Retrovirus capsid dimerization domain-like | automated matches | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d4bhxa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4bhxb1 | All alpha proteins | Acyl carrier protein-like | Retrovirus capsid dimerization domain-like | automated matches | automated matches | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4bhxb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | SCAN domain-like | 8079672 | 4001237 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Retrovirus capsid dimerization domain-like | 8079673 | 3001819 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Retrovirus capsid dimerization domain-like | 8079673 | 3001819 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SCAN | e4bhxA1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: SCAN | ECOD (1.6) |
B | SCAN | e4bhxB1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: SCAN | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.4020.10 | Mainly Alpha | Orthogonal Bundle | DNA breaking-rejoining enzymes fold | DNA breaking-rejoining enzymes | CATH (4.3.0) |
B | 1.10.4020.10 | Mainly Alpha | Orthogonal Bundle | DNA breaking-rejoining enzymes fold | DNA breaking-rejoining enzymes | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02023 | SCAN domain (SCAN) | SCAN domain | The SCAN domain [1] (named after SRE-ZBP, CTfin51, AW-1 and Number 18 cDNA) is found in several Pfam:PF00096 proteins. The domain has been shown to be able to mediate homo- and hetero-oligomerisation [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003309 | SCAN domain | Domain | |
IPR013087 | Zinc finger C2H2-type | Domain | |
IPR036236 | Zinc finger C2H2 superfamily | Homologous Superfamily | |
IPR038269 | SCAN domain superfamily | Homologous Superfamily |