4B3F
crystal structure of Ighmbp2 helicase
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2B Superfamily | Upf1 beta-barrel domain-like | 8090882 | 3002168 | SCOP2B (2022-06-29) |
A [auth X] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8090884 | 3002019 | SCOP2B (2022-06-29) |
A [auth X] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8090883 | 3002019 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | KOG1803 | e4b3fX4 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: KOG1803 | ECOD (1.6) |
A [auth X] | AAA_11_1 | e4b3fX3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: AAA_11_1 | ECOD (1.6) |
A [auth X] | AAA_12 | e4b3fX1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: AAA_12 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A [auth X] | 2.40.30.270 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF13086 | AAA domain (AAA_11) | AAA domain | This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. | Domain |
A [auth X] | PF13087 | AAA domain (AAA_12) | AAA domain | This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. | Domain |
A [auth X] | PF21138 | Helicase SMUBP-2/HCS1, 1B domain (SMUBP-2_HCS1_1B) | Helicase SMUBP-2/HCS1, 1B domain | Proteins in this entry belong to the DNA2/NAM7 helicase family and includes SMUBP-2 (also known as IGHMBP2) from mammals and HCS1 (also known as DNA polymerase alpha-associated DNA helicase A) from yeasts. This entry represents the 1B domain consisti ... | Domain |