4B2O
Crystal structure of Bacillus subtilis YmdB, a global regulator of late adaptive responses.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4b2oa_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
B | d4b2ob_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
C | d4b2oc_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
D | d4b2od_ | Alpha and beta proteins (a+b) | Metallo-dependent phosphatases | Metallo-dependent phosphatases | automated matches | automated matches | (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | DR1281-like | 8083124 | 4003864 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metallo-dependent phosphatases | 8083125 | 3001067 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Metallo-dependent phosphatases | 8083125 | 3001067 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-dependent phosphatases | 8083125 | 3001067 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-dependent phosphatases | 8083125 | 3001067 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | YmdB | e4b2oA1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: YmdB | ECOD (1.6) |
B | YmdB | e4b2oB1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: YmdB | ECOD (1.6) |
C | YmdB | e4b2oC1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: YmdB | ECOD (1.6) |
D | YmdB | e4b2oD1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: Metallo-dependent phosphatases (From Topology) | T: Metallo-dependent phosphatases | F: YmdB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
B | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
C | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
D | 3.60.21.10 | Alpha Beta | 4-Layer Sandwich | Purple Acid Phosphatase | chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00149 | Calcineurin-like phosphoesterase (Metallophos) | Calcineurin-like phosphoesterase | This family includes a diverse range of phosphoesterases [1], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD Swiss:P13457 or ... | Domain |