4AXH
Structure and mechanism of the first inverting alkylsulfatase specific for secondary alkylsulfatases
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4axha2 | Alpha and beta proteins (a+b) | SCP-like | SCP-like | automated matches | automated matches | (Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ], | SCOPe (2.08) |
A | d4axha1 | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ], | SCOPe (2.08) |
B | d4axhb2 | Alpha and beta proteins (a+b) | SCP-like | SCP-like | automated matches | automated matches | (Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ], | SCOPe (2.08) |
B | d4axhb1 | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ], | SCOPe (2.08) |
B | d4axhb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Pseudomonas sp. DSM 6611 ) [TaxId: 1007495 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Alkyl_sulf_dimr | e4axhA4 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Alkylsulfatase SdsA1 linker domain (From Topology) | T: Alkylsulfatase SdsA1 linker domain | F: Alkyl_sulf_dimr | ECOD (1.6) |
A | Alkyl_sulf_C | e4axhA3 | A: a+b two layers | X: Sterol carrier protein-like | H: Sterol carrier protein, SCP-related (From Topology) | T: Sterol carrier protein, SCP-related | F: Alkyl_sulf_C | ECOD (1.6) |
A | Lactamase_B | e4axhA5 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
B | Alkyl_sulf_dimr | e4axhB3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Alkylsulfatase SdsA1 linker domain (From Topology) | T: Alkylsulfatase SdsA1 linker domain | F: Alkyl_sulf_dimr | ECOD (1.6) |
B | Alkyl_sulf_C | e4axhB2 | A: a+b two layers | X: Sterol carrier protein-like | H: Sterol carrier protein, SCP-related (From Topology) | T: Sterol carrier protein, SCP-related | F: Alkyl_sulf_C | ECOD (1.6) |
B | Lactamase_B | e4axhB4 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.15.30 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
A | 1.25.40.880 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Alkyl sulfatase, dimerisation domain | CATH (4.3.0) |
A | 3.30.1050.10 | Alpha Beta | 2-Layer Sandwich | Nonspecific Lipid-transfer Protein | Chain A | CATH (4.3.0) |
B | 3.60.15.30 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
B | 1.25.40.880 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Alkyl sulfatase, dimerisation domain | CATH (4.3.0) |
B | 3.30.1050.10 | Alpha Beta | 2-Layer Sandwich | Nonspecific Lipid-transfer Protein | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14863 | Alkyl sulfatase dimerisation (Alkyl_sulf_dimr) | Alkyl sulfatase dimerisation | - | Repeat | |
PF14864 | Alkyl sulfatase C-terminal (Alkyl_sulf_C) | Alkyl sulfatase C-terminal | This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates [1]. | Domain | |
PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029229 | Alkyl sulfatase, C-terminal | Domain | |
IPR001279 | Metallo-beta-lactamase | Domain | |
IPR029228 | Alkyl sulfatase dimerisation domain | Domain | |
IPR038536 | Alkyl/aryl-sulfatase, dimerisation domain superfamily | Homologous Superfamily | |
IPR052195 | Bacterial Alkyl/Aryl-Sulfatase | Family | |
IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
IPR036527 | SCP2 sterol-binding domain superfamily | Homologous Superfamily | |
IPR044097 | Alkyl/aryl-sulfatase Bds1/ SdsA1 , MBL-fold | Domain |