4AQA
CRYSTAL STRUCTURE OF DEAFNESS ASSOCIATED MUTANT MOUSE CADHERIN-23 EC1- 2D124G AND PROTOCADHERIN-15 EC1-2 FORM I
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cadherin | e4aqaA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
B | EUF07711 | e4aqaB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: EUF07711 | ECOD (1.6) |
B | Cadherin | e4aqaB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
B | 2.60.40.3430 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00028 | Cadherin domain (Cadherin) | Cadherin domain | - | Domain | |
PF00028 | Cadherin domain (Cadherin) | Cadherin domain | - | Domain | |
PF18432 | Extracellular Cadherin domain (ECD) | Extracellular Cadherin domain | This is an extracellular cadherin (EC) domain which can be found at the N-terminal region of Protocadherin 15 (Pcdh15). Pcdh15 features exceptionally long extracellular domains containing 11 ECs [1]. These repeats are structurally similar, but not id ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR039808 | Cadherin | Family | |
IPR020894 | Cadherin conserved site | Conserved Site | |
IPR002126 | Cadherin-like | Domain | |
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR020894 | Cadherin conserved site | Conserved Site | |
IPR030718 | Extracellular cadherin domain superfamily | Homologous Superfamily | |
IPR041149 | Extracellular cadherin domain | Domain | |
IPR002126 | Cadherin-like | Domain |