Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyE set domains 8090310 3000070 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyE set domains 8090309 3000070 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF28858e4ak2A01 A: beta barrelsX: Voltage-gated ion channelsH: Voltage-gated ion channelsT: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinaseF: PF28858ECOD (v294.2)
AHemagglutinine4ak2A02 A: beta barrelsX: Voltage-gated ion channelsH: Voltage-gated ion channelsT: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinaseF: HemagglutininECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.2720 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
A2.60.40.2730 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF16319Surface glycan binding protein BT4661-like, N-terminal (Ig_BT4661_1st)Surface glycan binding protein BT4661-like, N-terminalThis entry, mainly found in Bacteroides, includes the putative surface glycan binding protein (SGBP) BT4661 from Bacteroides thetaiotaomicron (Swiss:Q89YS0). BT4661 appears to play a role in the bacterial degrading apparatus of the host glycosaminogl ...This entry, mainly found in Bacteroides, includes the putative surface glycan binding protein (SGBP) BT4661 from Bacteroides thetaiotaomicron (Swiss:Q89YS0). BT4661 appears to play a role in the bacterial degrading apparatus of the host glycosaminoglycans heparin (Hep) and heparan sulfate (HS). It shows six discrete domains that adopt an Ig-like fold arranged in an extended, curved conformation [1]. This is the first Ig-like domain.
Domain

InterPro: Protein Family Classification InterPro Database Homepage