4ABT
Crystal structure of Type IIF restriction endonuclease NgoMIV with cognate uncleaved DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF09015 | e4abtA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
B | PF09015 | e4abtB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PF09015 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
B | 3.40.50.10010 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Type-2 restriction enzyme NgoMIV | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09015 | NgoMIV restriction enzyme (NgoMIV_restric) | NgoMIV restriction enzyme | Members of this family are prokaryotic DNA restriction enzymes, exhibiting an alpha/beta structure, with a central region comprising a mixed six-stranded beta-sheet with alpha-helices on each side. A long 'arm' protrudes out of the core of the domain ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015105 | Type-2 restriction enzyme NgoMIV | Family | |
IPR037083 | Type-2 restriction enzyme NgoMIV superfamily | Homologous Superfamily | |
IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily |