4A3V
yeast regulatory particle proteasome assembly chaperone Hsm3 in complex with Rpt1 C-terminal fragment
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18794,PF18795 | e4a3vA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF18794,PF18795 | ECOD (1.6) |
C | PF18794,PF18795 | e4a3vC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF18794,PF18795 | ECOD (1.6) |
B | PF17862 | e4a3vB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
D | PF17862 | e4a3vD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.10.50 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | CATH (4.3.0) | |
A | 1.25.40.580 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
C | 1.25.10.50 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | CATH (4.3.0) | |
C | 1.25.40.580 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
B | 1.10.8.60 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
D | 1.10.8.60 | Mainly Alpha | Orthogonal Bundle | Helicase, Ruva Protein | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18795 | DNA mismatch repair protein HSM3, N terminal domain (HSM3_N) | DNA mismatch repair protein HSM3, N terminal domain | - | Repeat | |
PF18794 | DNA mismatch repair protein HSM3, C terminal domain (HSM3_C) | DNA mismatch repair protein HSM3, C terminal domain | - | Repeat | |
PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041335 | DNA mismatch repair protein HSM3, N-terminal domain | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR040752 | DNA mismatch repair protein HSM3, C-terminal domain | Domain | |
IPR048723 | 26S proteasome regulatory subunit 7-like, OB domain | Domain | |
IPR050221 | 26S Proteasome Regulatory ATPase | Family | |
IPR041569 | AAA ATPase, AAA+ lid domain | Domain | |
IPR003960 | ATPase, AAA-type, conserved site | Conserved Site | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |