Annotations: 3VPJ

crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa in complex with immune protein Tsi1

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Flu_NP	e3vpjA2	A: beta barrels	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Flu_NP	ECOD (v294.2)
E [auth C]	Flu_NP	e3vpjC2	A: beta barrels	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Flu_NP	ECOD (v294.2)
F [auth D]	Flu_NP	e3vpjD2	A: beta barrels	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Flu_NP	ECOD (v294.2)
B	Flu_NP	e3vpjB2	A: beta barrels	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Flu_NP	ECOD (v294.2)
C [auth E]	HSP90,HATPase_c_3	e3vpjE1	A: beta barrels	X: Flavodoxin-like	H: SH3	T: SH3	F: HSP90,HATPase_c_3	ECOD (v294.2)
D [auth F]	PI3K_C2	e3vpjF2	A: beta barrels	X: OB-fold	H: SH3	T: SH3	F: PI3K_C2	ECOD (v294.2)
G	PI3K_C2	e3vpjG2	A: beta barrels	X: OB-fold	H: SH3	T: SH3	F: PI3K_C2	ECOD (v294.2)
H	PI3K_C2	e3vpjH2	A: beta barrels	X: OB-fold	H: SH3	T: SH3	F: PI3K_C2	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)
E [auth C]	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)
F [auth D]	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)
B	3.90.1720.10	Alpha Beta	Alpha-Beta Complex	endopeptidase fold (from Nostoc punctiforme)	endopeptidase domain like (from Nostoc punctiforme)	CATH (4.3.0)
C [auth E]	2.40.128.650	Mainly Beta	Beta Barrel	Lipocalin		CATH (4.3.0)
D [auth F]	2.40.128.650	Mainly Beta	Beta Barrel	Lipocalin		CATH (4.3.0)
G	2.40.128.650	Mainly Beta	Beta Barrel	Lipocalin		CATH (4.3.0)
H	2.40.128.650	Mainly Beta	Beta Barrel	Lipocalin		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth E], D [auth F], G, H	PF21565	Immune protein Tsi1 (Tsi1)	Immune protein Tsi1	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, E [auth C], F [auth D]	type VI secretion exported 1	amidase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region
C [auth E], D [auth F], G, H	Tse1-specific immunity protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, E [auth C], F [auth D]	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
C [auth E], D [auth F], G, H	IPR049346	Immune protein Tsi1-like superfamily	Homologous Superfamily
C [auth E], D [auth F], G, H	IPR049345	Immune protein Tsi1	Family

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