3J1X

A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PrgH_4th	e3j1xB3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
B	PrgH_2nd	e3j1xB1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
B	PrgH_3rd	e3j1xB2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
L	PrgH_4th	e3j1xL3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
L	PrgH_2nd	e3j1xL1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
L	PrgH_3rd	e3j1xL2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
R	PrgH_4th	e3j1xR3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
R	PrgH_2nd	e3j1xR1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
R	PrgH_3rd	e3j1xR2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
A	PrgH_4th	e3j1xA5	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
A	PrgH_2nd	e3j1xA6	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
A	PrgH_3rd	e3j1xA4	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
C	PrgH_4th	e3j1xC3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
C	PrgH_2nd	e3j1xC1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
C	PrgH_3rd	e3j1xC2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
D	PrgH_4th	e3j1xD3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
D	PrgH_2nd	e3j1xD1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
D	PrgH_3rd	e3j1xD2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
E	PrgH_4th	e3j1xE3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
E	PrgH_2nd	e3j1xE1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
E	PrgH_3rd	e3j1xE2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
F	PrgH_4th	e3j1xF3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
F	PrgH_2nd	e3j1xF1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
F	PrgH_3rd	e3j1xF2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
G	PrgH_4th	e3j1xG3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
G	PrgH_2nd	e3j1xG1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
G	PrgH_3rd	e3j1xG2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
H	PrgH_4th	e3j1xH3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
H	PrgH_2nd	e3j1xH1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
H	PrgH_3rd	e3j1xH2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
I	PrgH_4th	e3j1xI3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
I	PrgH_2nd	e3j1xI1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
I	PrgH_3rd	e3j1xI2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
J	PrgH_4th	e3j1xJ3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
J	PrgH_2nd	e3j1xJ1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
J	PrgH_3rd	e3j1xJ2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
K	PrgH_4th	e3j1xK3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
K	PrgH_2nd	e3j1xK1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
K	PrgH_3rd	e3j1xK2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
M	PrgH_4th	e3j1xM3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
M	PrgH_2nd	e3j1xM1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
M	PrgH_3rd	e3j1xM2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
N	PrgH_4th	e3j1xN3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
N	PrgH_2nd	e3j1xN1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
N	PrgH_3rd	e3j1xN2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
O	PrgH_4th	e3j1xO3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
O	PrgH_2nd	e3j1xO1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
O	PrgH_3rd	e3j1xO2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
P	PrgH_4th	e3j1xP3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
P	PrgH_2nd	e3j1xP1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
P	PrgH_3rd	e3j1xP2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
Q	PrgH_4th	e3j1xQ3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
Q	PrgH_2nd	e3j1xQ1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
Q	PrgH_3rd	e3j1xQ2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
S	PrgH_4th	e3j1xS3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
S	PrgH_2nd	e3j1xS1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
S	PrgH_3rd	e3j1xS2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
T	PrgH_4th	e3j1xT3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
T	PrgH_2nd	e3j1xT1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
T	PrgH_3rd	e3j1xT2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
U	PrgH_4th	e3j1xU3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
U	PrgH_2nd	e3j1xU1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
U	PrgH_3rd	e3j1xU2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
V	PrgH_4th	e3j1xV3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
V	PrgH_2nd	e3j1xV1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
V	PrgH_3rd	e3j1xV2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
W	PrgH_4th	e3j1xW3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
W	PrgH_2nd	e3j1xW1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
W	PrgH_3rd	e3j1xW2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)
X	PrgH_4th	e3j1xX3	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_4th	ECOD (1.6)
X	PrgH_2nd	e3j1xX1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_2nd	ECOD (1.6)
X	PrgH_3rd	e3j1xX2	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif I in type III secretion system (From Topology)	T: Ring-building motif I in type III secretion system	F: PrgH_3rd	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	PF09480	Type III secretion system protein PrgH-EprH (PrgH) (PrgH)	Type III secretion system protein PrgH-EprH (PrgH)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	Protein PrgH	-	-	cell periphery plasma membrane membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR019029	Type III secretion system, PrgH/EprH-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR013387	Type III secretion system, PrgH/EprH	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

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3J1X

A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage