3GD9

Crystal structure of laminaripentaose-producing beta-1,3-glucanase in complex with laminaritetraose

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Osmotin/thaumatin-like	8091286	3001451	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Osmotin/thaumatin-like	8091286	3001451	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GH64 beta-glucanase insert domain-like	8091287	3002495	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_64_1st	e3gd9A2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like (From Topology)	T: Osmotin-like	F: Glyco_hydro_64_1st	ECOD (1.6)
A	Glyco_hydro_64_2nd	e3gd9A1	A: a+b two layers	X: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology)	H: Laminaripentaose-producing beta-1,3-glucanase insertion domain (From Topology)	T: Laminaripentaose-producing beta-1,3-glucanase insertion domain	F: Glyco_hydro_64_2nd	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.110.10	Mainly Beta	Sandwich	Thaumatin	Thaumatin	CATH (4.3.0)
A	3.30.920.50	Alpha Beta	2-Layer Sandwich	Metal Transport, Frataxin	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16483	Beta-1,3-glucanase (Glyco_hydro_64)	Beta-1,3-glucanase	Family 64 glycoside hydrolases have beta-1,3-glucanase activity [1,2].	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR042517	Beta-1,3-glucanase, N-terminal, subdomain 2	Homologous Superfamily
A	IPR032477	Glycoside hydrolase 64	Domain
A	IPR037398	Glucan endo-1,3-beta-glucosidase	Family
A	IPR037176	Osmotin/thaumatin-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.