3B4Q

Crystal structure of a conserved protein domain (unknown function) from Corynebacterium diphtheriae

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	DIP0775 C-terminal domain-like	8046674	4005233	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	DIP0775 C-terminal domain-like	8102987	3002776	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	DIP0775 C-terminal domain-like	8102987	3002776	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF3235	e3b4qA1	A: alpha bundles	X: DUF3235 (From Topology)	H: DUF3235 (From Topology)	T: DUF3235	F: DUF3235	ECOD (1.6)
B	DUF3235	e3b4qB1	A: alpha bundles	X: DUF3235 (From Topology)	H: DUF3235 (From Topology)	T: DUF3235	F: DUF3235	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1200.100	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
B	1.10.1200.100	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF11574	Resuscitation-promoting factor Rpf1, C-terminal (Rpf1_C)	Resuscitation-promoting factor Rpf1, C-terminal	This is the C-terminal domain of Resuscitation-promoting factor Rpf1 from Corynebacterium glutamicum [1], which is adjacent the RPF domain (Pfam:PF06737). The function of this domain is not yet known. Rpf1 has peptidoglycan hydrolytic activity and st ...	This is the C-terminal domain of Resuscitation-promoting factor Rpf1 from Corynebacterium glutamicum [1], which is adjacent the RPF domain (Pfam:PF06737). The function of this domain is not yet known. Rpf1 has peptidoglycan hydrolytic activity and stimulates resuscitation of dormant cells [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Uncharacterized protein	hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR021630	Resuscitation-promoting factor Rpf1, C-terminal	Domain
A, B	IPR010618	Resuscitation-promoting factor, core lysozyme-like domain	Domain
A, B	IPR044905	Resuscitation-promoting factor Rpf1, C-terminal superfamily	Homologous Superfamily
A, B	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.