Annotations: 3B4Q

Crystal structure of a conserved protein domain (unknown function) from Corynebacterium diphtheriae

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	DIP0775 C-terminal domain-like	8102987	3002776	SCOP2B (2022-06-29)
A	SCOP2 Family	DIP0775 C-terminal domain-like	8046674	4005233	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	DIP0775 C-terminal domain-like	8102987	3002776	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Rpf1_C	e3b4qB1	A: beta barrels	X: HTH	H: Nudix	T: Nudix	F: Rpf1_C	ECOD (v294.2)
A	Rpf1_C	e3b4qA1	A: beta barrels	X: Tetracyclin repressor-like, C-terminal domain	H: Phosphoprotein XD domain	T: Phosphoprotein XD domain	F: Rpf1_C	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.1200.100	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
A	1.10.1200.100	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF11574	Resuscitation-promoting factor Rpf1, C-terminal (Rpf1_C)	Resuscitation-promoting factor Rpf1, C-terminal	This is the C-terminal domain of Resuscitation-promoting factor Rpf1 from Corynebacterium glutamicum [1], which is adjacent the RPF domain (Pfam:PF06737). The function of this domain is not yet known. Rpf1 has peptidoglycan hydrolytic activity and st ...	This is the C-terminal domain of Resuscitation-promoting factor Rpf1 from Corynebacterium glutamicum [1], which is adjacent the RPF domain (Pfam:PF06737). The function of this domain is not yet known. Rpf1 has peptidoglycan hydrolytic activity and stimulates resuscitation of dormant cells [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Uncharacterized protein	hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR021630	Resuscitation-promoting factor Rpf1, C-terminal	Domain
A, B	IPR010618	Resuscitation-promoting factor, core lysozyme-like domain	Domain
A, B	IPR044905	Resuscitation-promoting factor Rpf1, C-terminal superfamily	Homologous Superfamily
A, B	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.