3WZ4 | pdb_00003wz4

Structure of the periplasmic domain of DotI (crystal form I)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)
BSCOP2 FamilyDotI/IcmL-like 8046387 4005055 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyNTF2-like 8052403 3000472 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyNTF2-like 8052403 3000472 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HHypAe3wz4H1 A: alpha bundlesX: Ribosomal protein S7H: HypA Ni-binding domainT: HypA Ni-binding domainF: HypAECOD (develop294)
GOB_Dis3e3wz4G1 A: alpha bundlesX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteinsT: OB domain in putative lipoprotein BF3042-related proteinsF: OB_Dis3ECOD (develop294)
FPhyHe3wz4F1 A: alpha bundlesX: ssDNA-binding transcriptional regulator domain-likeH: ssDNA-binding transcriptional regulator domainT: ssDNA-binding transcriptional regulator domainF: PhyHECOD (develop294)
ELactamase_B_2e3wz4E1 A: alpha bundlesX: Cytidine deaminase-likeH: Cytidine deaminase-likeT: Cytidine deaminase-likeF: Lactamase_B_2ECOD (develop294)
DPhyHe3wz4D1 A: alpha bundlesX: ssDNA-binding transcriptional regulator domain-likeH: ssDNA-binding transcriptional regulator domainT: ssDNA-binding transcriptional regulator domainF: PhyHECOD (develop294)
CSas-5-like_implicoe3wz4C1 A: alpha bundlesX: OB-foldH: OB domain in putative lipoprotein BF3042-related proteinsT: OB domain in putative lipoprotein BF3042-related proteinsF: Sas-5-like_implicoECOD (develop294)
Be3wz4B1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (develop294)
Ae3wz4A1 A: alpha bundlesX: Ribosomal protein S7H: Ribosomal protein S7T: Ribosomal protein S7F:ECOD (develop294)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR021055Type-IV b secretion system, inner-membrane complex componentFamily