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 3WFH | pdb_00003wfh

Crystal structure of anti-Prostaglandin E2 Fab fragment PGE2 complex

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3wfhb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd3wfhb2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad3wfha_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAminotran_4e3wfhB1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesT: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4ECOD (v295.2)
AAminotran_4e3wfhA1 A: alpha arraysX: Immunoglobulin-like beta-sandwichH: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesT: a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymesF: Aminotran_4ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
MAB FAB H FRAGMENT L-KAPPA Mus musculus (house mouse) IGKV1-117*01, IGKJ5*01, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202637-0)
MAB FAB H FRAGMENT VH-CH1 Mus musculus (house mouse) IGHV1-71*01, IGHV1-62-2*01, IGHJ3*01, IGHG1*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202637-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Light ChainIGKV1 Kappa(Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acidSAbDab (2026-09-25)
Heavy ChainIGHV1 -(Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acidSAbDab (2026-09-25)