3VUA
Apo IsdH-NEAT3 in space group P3121 at a resolution of 1.85 A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | NEAT domain-like | 8100364 | 3002054 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | NEAT | e3vuaB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
E | NEAT | e3vuaE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
F | NEAT | e3vuaF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
A | NEAT | e3vuaA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
C | NEAT | e3vuaC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
D | NEAT | e3vuaD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: NEAT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
E | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
F | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D | 2.60.40.1850 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05031 | Iron Transport-associated domain (NEAT) | Iron Transport-associated domain | NEAT domains are heme and/or hemoprotein-binding modules highly conserved in secondary structure [1]. They have roles in hemoprotein binding, heme extraction and heme transfer [2] | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Iron-regulated surface determinant protein H | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
IPR050436 | Iron-regulated surface determinant protein A | Family | |
IPR006635 | NEAT domain | Domain | |
IPR019930 | Iron-regulated surface determinant protein H | Family | |
IPR048652 | Iron-regulated surface determinant protein H/B, linker domain | Domain | |
IPR037250 | NEAT domain superfamily | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |