3VU1
Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PhAglB-L, O74088_PYRHO) from Pyrococcus horikoshii
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07568 | e3vu1A10 | A: beta barrels | X: STT3/PglB/AglB beta-barrel domain (From Topology) | H: STT3/PglB/AglB beta-barrel domain (From Topology) | T: STT3/PglB/AglB beta-barrel domain | F: EUF07568 | ECOD (1.6) |
A | EUF07789 | e3vu1A11 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domains in STT3 (From Topology) | T: Ig-like domains in STT3 | F: EUF07789 | ECOD (1.6) |
A | EUF07790 | e3vu1A9 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domains in STT3 (From Topology) | T: Ig-like domains in STT3 | F: EUF07790 | ECOD (1.6) |
A | KOG2292 | e3vu1A12 | A: a/b three-layered sandwiches | X: STT3/PglB/AglB core domain (From Topology) | H: STT3/PglB/AglB core domain (From Topology) | T: STT3/PglB/AglB core domain | F: KOG2292 | ECOD (1.6) |
B | EUF07568 | e3vu1B3 | A: beta barrels | X: STT3/PglB/AglB beta-barrel domain (From Topology) | H: STT3/PglB/AglB beta-barrel domain (From Topology) | T: STT3/PglB/AglB beta-barrel domain | F: EUF07568 | ECOD (1.6) |
B | EUF07789 | e3vu1B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domains in STT3 (From Topology) | T: Ig-like domains in STT3 | F: EUF07789 | ECOD (1.6) |
B | EUF07790 | e3vu1B4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Ig-like domains in STT3 (From Topology) | T: Ig-like domains in STT3 | F: EUF07790 | ECOD (1.6) |
B | KOG2292 | e3vu1B1 | A: a/b three-layered sandwiches | X: STT3/PglB/AglB core domain (From Topology) | H: STT3/PglB/AglB core domain (From Topology) | T: STT3/PglB/AglB core domain | F: KOG2292 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.12610 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 2.40.128.390 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
A | 2.60.40.3020 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A | 2.60.40.3030 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 3.40.50.12610 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 2.40.128.390 | Mainly Beta | Beta Barrel | Lipocalin | CATH (4.3.0) | |
B | 2.60.40.3020 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B | 2.60.40.3030 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21618 | Oligosaccharyl transferase, Peripheral 1 domain (OST_P1) | Oligosaccharyl transferase, Peripheral 1 domain | This domain is found in Oligosaccharyl transferase from Pyrococcus furiosus (OST, also known as AglB-L) and similar archaeal sequences. OST catalyses the co-translational transfer of an oligosaccharide from a lipid donor to an asparagine residue in n ... | Domain | |
PF18235 | Oligosaccharyltransferase Peripheral 2 domain (OST_P2) | Oligosaccharyltransferase Peripheral 2 domain | This is a domain found in the C-terminal region of STT3 present in P. furiosus. STT3 is an Oligosaccharyltransferase which catalyzes the transfer of a heptasaccharide, containing one hexouronate and two pentose residues, onto peptides in an Asn-X-Thr ... | Domain | |
PF18246 | Oligosaccharyltransferase Insert domain (OST_IS) | Oligosaccharyltransferase Insert domain | This is a domain found in STT3 present in P. furiosus. In P. furiousus, STT3 is an Oligosaccharyltransferase which catalyzes the transfer of a heptasaccharide, containing one hexouronate and two pentose residues, onto peptides in an Asn-X-Thr/Ser-mot ... | Domain |