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 3VIB | pdb_00003vib

Structural basis for multidrug recognition and antimicrobial resistance by MTRR, an efflux pump regulator from Neisseria Gonorrhoeae

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyTetR C-terminal domain-like 8090168 3000086 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyHomeodomain-like 8090167 3000001 SCOP2B (2022-06-29)
CSCOP2 FamilyTetracyclin repressor-like 8050804 4000333 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyTetR C-terminal domain-like 8090168 3000086 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyHomeodomain-like 8090167 3000001 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyHomeodomain-like 8090167 3000001 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTetR C-terminal domain-like 8090168 3000086 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTetR C-terminal domain-like 8090168 3000086 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHomeodomain-like 8090167 3000001 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DVinculine3vibD2 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF: VinculinECOD (v295.2)
CVinculine3vibC1 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF: VinculinECOD (v295.2)
BVinculine3vibB2 A: alpha arraysX: DEATH domainH: PH domain-likeT: PH domain-likeF: VinculinECOD (v295.2)
AGFPe3vibA1 A: alpha arraysX: GIY-YIG endonucleaseH: GIY-YIG endonucleaseT: GIY-YIG endonucleaseF: GFPECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
C1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
B1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)
A1.10.357.10 Mainly Alpha Orthogonal Bundle Tetracycline Repressor domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
MtrR - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR023772DNA-binding HTH domain, TetR-type, conserved siteConserved Site
A, B, C, D
IPR009057Homeodomain-like superfamilyHomologous Superfamily
A, B, C, D
IPR050624Nucleoid occlusion factor SlmA/HTH-type transcriptional regulatorFamily
A, B, C, D
IPR001647DNA-binding HTH domain, TetR-typeDomain
A, B, C, D
IPR013572Transcription regulator MAATS, C-terminalDomain
A, B, C, D
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilyHomologous Superfamily