3V2U
Crystal structure of the yeast GAL regulon complex of the repressor, Gal80p, and the transducer, Gal3p, with galactose and ATP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Glucose 6-phosphate dehydrogenase-like | 8084460 | 4000091 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GAPDH-like | 8084461 | 3000043 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | GAPDH-like | 8084461 | 3000043 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG2741 | e3v2uA2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: KOG2741 | ECOD (1.6) |
A | UNK_F_TYPE | e3v2uA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: UNK_F_TYPE | ECOD (1.6) |
B | KOG2741 | e3v2uB5 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: KOG2741 | ECOD (1.6) |
B | UNK_F_TYPE | e3v2uB6 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: UNK_F_TYPE | ECOD (1.6) |
C | GHMP_kinases_N | e3v2uC1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
C | GHMP_kinases_C | e3v2uC2 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
D | GHMP_kinases_N | e3v2uD4 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: GHMP_kinases_N | ECOD (1.6) |
D | GHMP_kinases_C | e3v2uD3 | A: a+b two layers | X: Alpha-beta plaits | H: GHMP Kinase, C-terminal domain (From Topology) | T: GHMP Kinase, C-terminal domain | F: GHMP_kinases_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
A | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (4.3.0) |
C | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (utative) |
C | 3.30.70.3170 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (utative) | |
C | 1.20.1440.340 | Mainly Alpha | Up-down Bundle | de novo design (two linked rop proteins) | CATH (utative) | |
D | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (utative) |
D | 3.30.70.3170 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (utative) | |
D | 1.20.1440.340 | Mainly Alpha | Up-down Bundle | de novo design (two linked rop proteins) | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22685 | Gal80p, C-terminal domain (Gal80p_C-like) | Gal80p, C-terminal domain | This domain is found in the homologues of Gal80p, an yeast regulatory protein closely related to glucose-fructose oxidoreductase. In Gal80p, this domain is likely involved in the binding of Gal4p [1]. | Domain | |
PF01408 | Oxidoreductase family, NAD-binding Rossmann fold (GFO_IDH_MocA) | Oxidoreductase family, NAD-binding Rossmann fold | - | Family | |
PF08544 | GHMP kinases C terminal (GHMP_kinases_C) | GHMP kinases C terminal | - | Family | |
PF10509 | Galactokinase galactose-binding signature (GalKase_gal_bdg) | Galactokinase galactose-binding signature | This is the highly conserved galactokinase signature sequence which appears to be present in all galactokinases irrespective of how many other ATP binding sites, etc that they carry [1]. The function of this domain appears to be to bind galactose [2] ... | Domain | |
PF00288 | GHMP kinases N terminal domain (GHMP_kinases_N) | GHMP kinases N terminal domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR051317 | Gfo/Idh/MocA family oxidoreductases | Family | |
IPR000683 | Gfo/Idh/MocA-like oxidoreductase, N-terminal | Domain | |
IPR013750 | GHMP kinase, C-terminal domain | Domain | |
IPR006206 | Mevalonate/galactokinase | Family | |
IPR019539 | Galactokinase, N-terminal domain | Domain | |
IPR036554 | GHMP kinase, C-terminal domain superfamily | Homologous Superfamily | |
IPR006204 | GHMP kinase N-terminal domain | Domain | |
IPR019741 | Galactokinase, conserved site | Conserved Site | |
IPR000705 | Galactokinase | Family | |
IPR020568 | Ribosomal protein uS5 domain 2-type superfamily | Homologous Superfamily | |
IPR014721 | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup | Homologous Superfamily |