3UZT
Structure of the C13.18 RNA Aptamer in Complex with G Protein-Coupled Receptor Kinase 2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Regulator of G-protein signaling, RGS | 8034089 | 3000835 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PH domain-like | 8034091 | 3000134 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8034093 | 3000066 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PH | e3uztA7 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: PH | ECOD (1.6) |
A | RGS | e3uztA2 | A: alpha bundles | X: Regulator of G-protein signaling, RGS (From Topology) | H: Regulator of G-protein signaling, RGS (From Topology) | T: Regulator of G-protein signaling, RGS | F: RGS | ECOD (1.6) |
A | Pkinase_Tyr | e3uztA6 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.1270 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
A | 1.10.167.10 | Mainly Alpha | Orthogonal Bundle | Regulator of G-protein Signalling 4 | domain 2 | CATH (4.3.0) |
A | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
A | 1.10.510.10 | Mainly Alpha | Orthogonal Bundle | Transferase(Phosphotransferase) | domain 1 | CATH (4.3.0) |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00615 | Regulator of G protein signaling domain (RGS) | Regulator of G protein signaling domain | RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits. | Domain | |
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain | |
PF00169 | PH domain (PH) | PH domain | PH stands for pleckstrin homology. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016137 | RGS domain | Domain | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR036305 | RGS domain superfamily | Homologous Superfamily | |
IPR000719 | Protein kinase domain | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR000961 | AGC-kinase, C-terminal | Domain | |
IPR044926 | RGS, subdomain 2 | Homologous Superfamily | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR000239 | GPCR kinase | Family | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |