3UKT
Structure of the C-linker/CNBHD of zELK channels in P1 21 1 space group
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d3uktb_ | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | automated matches | automated matches | leopard danio,zebra danio,zebra fish (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
B [auth A] | d3ukta_ | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | automated matches | automated matches | leopard danio,zebra danio,zebra fish (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
C | d3uktc_ | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | automated matches | automated matches | leopard danio,zebra danio,zebra fish (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
D | d3uktd_ | All beta proteins | Double-stranded beta-helix | cAMP-binding domain-like | automated matches | automated matches | leopard danio,zebra danio,zebra fish (Danio rerio ) [TaxId: 7955 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | cNMP_binding_1 | e3uktB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding_1 | ECOD (1.6) |
B [auth A] | cNMP_binding_1 | e3uktA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding_1 | ECOD (1.6) |
C | cNMP_binding_1 | e3uktC1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding_1 | ECOD (1.6) |
D | cNMP_binding_1 | e3uktD1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: cNMP_binding_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
B [auth A] | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
C | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
D | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A], C, D | PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A], C, D | IPR005821 | Ion transport domain | Domain |
A [auth B], B [auth A], C, D | IPR003938 | Potassium channel, voltage-dependent, EAG/ELK/ERG | Family |
A [auth B], B [auth A], C, D | IPR000014 | PAS domain | Domain |
A [auth B], B [auth A], C, D | IPR000595 | Cyclic nucleotide-binding domain | Domain |
A [auth B], B [auth A], C, D | IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |
A [auth B], B [auth A], C, D | IPR035965 | PAS domain superfamily | Homologous Superfamily |
A [auth B], B [auth A], C, D | IPR001610 | PAC motif | Repeat |
A [auth B], B [auth A], C, D | IPR000700 | PAS-associated, C-terminal | Domain |
A [auth B], B [auth A], C, D | IPR050818 | Voltage-gated potassium channel family H | Family |
A [auth B], B [auth A], C, D | IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily |
A [auth B], B [auth A], C, D | IPR003950 | Potassium channel, voltage-dependent, ELK | Family |