Crystal Structure of V. cholerae SeqA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d3sk7b1 | Alpha and beta proteins (a+b) | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | automated matches | (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], | SCOPe (2.08) |
| B | d3sk7b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], | SCOPe (2.08) |
| A | d3sk7a1 | Alpha and beta proteins (a+b) | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | automated matches | (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], | SCOPe (2.08) |
| A | d3sk7a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrio cholerae NCTC 8457 ) [TaxId: 417399 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Cathelicidins | e3sk7B1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Cathelicidins | ECOD (v294.2) |
| A | fn3 | e3sk7A1 | A: beta barrels | X: Globin-like | H: Ring-building motif I in type III secretion system | T: Ring-building motif I in type III secretion system | F: fn3 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.1380.10 | Mainly Alpha | Up-down Bundle | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | CATH (4.3.0) |
| A | 1.20.1380.10 | Mainly Alpha | Up-down Bundle | Replication modulator SeqA, C-terminal DNA-binding domain | Replication modulator SeqA, C-terminal DNA-binding domain | CATH (4.3.0) |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| FME | Parent Component: MET :  AA0021 , AA0566 :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 | |














