Crystal structure of a putative hydrolase (BT_2193) from Bacteroides thetaiotaomicron VPI-5482 at 1.25 A resolution
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | BT_2193 N-terminal domain-like | 8045123 | 4004304 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | BT_2193 C-terminal domain-like | 8049874 | 4006670 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | CWBR2-like | 8056029 | 3002334 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Glycoside hydrolase/deacetylase | 8056026 | 3001025 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | CWBR2-like | 8056027 | 3002334 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | CWBR2-like | 8056028 | 3002334 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | GxGYxYP_N | e3sggA1 | A: beta barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase | T: Glycoside hydrolase/deacetylase | F: GxGYxYP_N | ECOD (v294.2) |
| A | GxGYxYP_N_2nd | e3sggA2 | A: beta barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase | T: Glycoside hydrolase/deacetylase | F: GxGYxYP_N_2nd | ECOD (v294.2) |
| A | GxGYxYP_N_3rd | e3sggA3 | A: beta barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase | T: Glycoside hydrolase/deacetylase | F: GxGYxYP_N_3rd | ECOD (v294.2) |
| A | GxGYxYP_C | e3sggA4 | A: beta barrels | X: TIM beta/alpha-barrel | H: Glycoside hydrolase/deacetylase | T: Glycoside hydrolase/deacetylase | F: GxGYxYP_C | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.20.490 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | GxGYxYP glycoside hydrolase, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF20958 | GxGYxYP third domain (GxGYxYP_N_3rd) | GxGYxYP third domain | This entry represents a domain that is found repeated in three copies per protein and is likely to be involved in binding the bacterial cell wall. This domain is found in association with Pfam:PF14323. | Domain | |
| PF20957 | GxGYxYP_N second domain (GxGYxYP_N_2nd) | GxGYxYP_N second domain | This entry represents a domain that is found repeated in three copies per protein and is likely to be involved in binding the bacterial cell wall. This domain is found in association with Pfam:PF14323. | Domain | |
| PF14323 | GxGYxYP putative glycoside hydrolase C-terminal domain (GxGYxYP_C) | GxGYxYP putative glycoside hydrolase C-terminal domain | This family carries a characteristic sequence motif, GxGYxYP, and is a putative glycoside hydrolase. This domain is found in association with Pfam:PF16216. Associated families are sugar-processing domains. | Domain | |
| PF16216 | GxGYxYP_N 1st domain (GxGYxYP_N) | GxGYxYP_N 1st domain | This entry represents a domain that is found repeated in three copies per protein and is likely to be involved in binding the bacterial cell wall. This domain is found in association with Pfam:PF14323. | Domain |














