Annotations: 3S2C

Structure of the thermostable GH51 alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	I-set	e3s2cA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: I-set	ECOD (v294.2)
F	Vinculin	e3s2cF5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
L	Vinculin	e3s2cL5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
K	Vinculin	e3s2cK5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
J	Vinculin	e3s2cJ5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
I	Vinculin	e3s2cI5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
H	Vinculin	e3s2cH5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
G	Vinculin	e3s2cG5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
E	Vinculin	e3s2cE5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
D	Vinculin	e3s2cD5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
C	Vinculin	e3s2cC5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)
B	Vinculin	e3s2cB5	A: beta barrels	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: Vinculin	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
F	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
F	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
L	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
L	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
K	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
K	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
J	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
J	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
I	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
I	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
H	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
H	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
G	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
G	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
E	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
E	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
D	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
D	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
C	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
C	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)
B	2.60.40.1180	Mainly Beta	Sandwich	Immunoglobulin-like	Golgi alpha-mannosidase II	CATH (4.3.0)
B	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Alpha-N-arabinofuranosidase	alpha-L-arabinofuranosidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	carbohydrate metabolic process polysaccharide metabolic process catabolic process polysaccharide catabolic process carbohydrate catabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process macromolecule catabolic process monosaccharide metabolic process arabinose metabolic process small molecule metabolic process pentose metabolic process carbohydrate metabolic process polysaccharide metabolic process catabolic process polysaccharide catabolic process carbohydrate catabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process macromolecule catabolic process monosaccharide metabolic process arabinose metabolic process small molecule metabolic process pentose metabolic process L-arabinose metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR055235	Alpha-L-arabinofuranosidase 1, catalytic domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR013780	Glycosyl hydrolase, all-beta	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR010720	Alpha-L-arabinofuranosidase, C-terminal	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3S2C | pdb_00003s2c

Structure of the thermostable GH51 alpha-L-arabinofuranosidase from Thermotoga petrophila RKU-1

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage