3R5C
Pseudomonas aeruginosa DapD (PA3666) in complex with CoA and succinate
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8050589 | 3001804 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8050589 | 3001804 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8050589 | 3001804 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF14602 | e3r5cA1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF14602 | ECOD (1.6) |
A | PF14789,PF14790 | e3r5cA2 | A: a+b complex topology | X: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | H: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | T: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain | F: PF14789,PF14790 | ECOD (1.6) |
B | PF14602 | e3r5cB1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF14602 | ECOD (1.6) |
B | PF14789,PF14790 | e3r5cB2 | A: a+b complex topology | X: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | H: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | T: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain | F: PF14789,PF14790 | ECOD (1.6) |
C | PF14602 | e3r5cC1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: PF14602 | ECOD (1.6) |
C | PF14789,PF14790 | e3r5cC2 | A: a+b complex topology | X: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | H: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain (From Topology) | T: Tetrahydrodipicolinate N-succinyletransferase N-terminal domain | F: PF14789,PF14790 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.2010 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
A | 3.30.60.70 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
B | 3.30.70.2010 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
B | 3.30.60.70 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
B | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
C | 3.30.70.2010 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
C | 3.30.60.70 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
C | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14790 | Tetrahydrodipicolinate N-succinyltransferase N-terminal (THDPS_N) | Tetrahydrodipicolinate N-succinyltransferase N-terminal | This is the N-terminal domain of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [1]. | Domain | |
PF14602 | Hexapeptide repeat of succinyl-transferase (Hexapep_2) | Hexapeptide repeat of succinyl-transferase | - | Repeat | |
PF14789 | Tetrahydrodipicolinate N-succinyltransferase middle (THDPS_M) | Tetrahydrodipicolinate N-succinyltransferase middle | This is the middle domain of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [1]. | Domain |