Structure of an Anti-Methotrexate CDR1-4 Graft VHH Antibody in Complex with Methotrexate


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EFeoB_Cytoe3qxvE1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.2)
DFeoB_Cytoe3qxvD1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.2)
CFeoB_Cytoe3qxvC1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.2)
BFeoB_Cytoe3qxvB1 A: beta barrelsX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: FeoB_CytoECOD (v294.2)
ARase3qxvA1 A: beta barrelsX: EF-handH: Insect pheromone/odorant-binding proteinsT: Insect pheromone/odorant-binding proteinsF: RasECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B, C, D, E
Llama heavy chain VH domain Anti-Methotrexate VH Lama glama (llama) IGHV3S3*01, IGHJ4*01 V-DOMAIN VH IG (VH) IMGT (202617-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B, C, D, E
Heavy ChainIGHV1 -METHOTREXATESAbDab (2026-05-08)