Crystal structure of a Putative Xylose isomerase (YP_426450.1) from RHODOSPIRILLUM RUBRUM ATCC 11170 at 1.90 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | AP_endonuc_2 | e3qxbA1 | A: beta barrels | X: N-terminal beta-sandwich domain in anthrax protective antigen | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: AP_endonuc_2 | ECOD (v294.2) |
| B | Pkinase,Pkinase_C | e3qxbB1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Pkinase,Pkinase_C | ECOD (v294.2) |
| C | Pkinase,Pkinase_C | e3qxbC1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Pkinase,Pkinase_C | ECOD (v294.2) |
| D | Pkinase,Pkinase_C | e3qxbD1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Pkinase,Pkinase_C | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.20.150 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Divalent-metal-dependent TIM barrel enzymes | CATH (4.3.0) |
| B | 3.20.20.150 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Divalent-metal-dependent TIM barrel enzymes | CATH (4.3.0) |
| C | 3.20.20.150 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Divalent-metal-dependent TIM barrel enzymes | CATH (4.3.0) |
| D | 3.20.20.150 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Divalent-metal-dependent TIM barrel enzymes | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01261 | Xylose isomerase-like TIM barrel (AP_endonuc_2) | Xylose isomerase-like TIM barrel | This TIM alpha/beta barrel structure is found in xylose isomerase (Swiss:P19148) and in endonuclease IV (Swiss:P12638, EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative Xylose isomerase | - | - |
