3QDR
Structural characterization of the interaction of colicin A, colicin N, and TolB with the TolAIII translocon
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3qdra_ | Alpha and beta proteins (a+b) | TolA/TonB C-terminal domain | TolA/TonB C-terminal domain | TolA | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TolA | e3qdrA2 | A: a+b two layers | X: TolA/TonB C-terminal domain | H: TolA/TonB C-terminal domain (From Topology) | T: TolA/TonB C-terminal domain | F: TolA | ECOD (1.6) |
B | EUF07603 | e3qdrB1 | A: beta meanders | X: Colicin-A N-terminal domain (From Topology) | H: Colicin-A N-terminal domain (From Topology) | T: Colicin-A N-terminal domain | F: EUF07603 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1150.10 | Alpha Beta | 2-Layer Sandwich | Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag | Chain: A | CATH (4.3.0) |
B | 2.30.30.970 | Mainly Beta | Roll | SH3 type barrels. | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22348 | Colicin-A N-terminal domain (ColA_N) | Colicin-A N-terminal domain | This entry represents the N-terminal translocation domain of colicin A, an endonuclease active on both single- and double-stranded DNA but with undefined specificity [1,2]. This domain interacts directly with TolAIII (C-terminal domain of TolA) which ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014161 | Tol-Pal system, TolA | Family | |
IPR055023 | Colicin-A, N-terminal domain | Domain | |
IPR038283 | Channel forming colicin, C-terminal domain superfamily | Homologous Superfamily | |
IPR000293 | Channel forming colicin, C-terminal cytotoxic | Domain |