3PZL
The crystal structure of agmatine ureohydrolase of Thermoplasma volcanium
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3pzla_ | Alpha and beta proteins (a/b) | Arginase/deacetylase | Arginase/deacetylase | automated matches | automated matches | (Thermoplasma volcanium GSS1 ) [TaxId: 273116 ], | SCOPe (2.08) |
B | d3pzlb_ | Alpha and beta proteins (a/b) | Arginase/deacetylase | Arginase/deacetylase | automated matches | automated matches | (Thermoplasma volcanium GSS1 ) [TaxId: 273116 ], | SCOPe (2.08) |
C | d3pzlc_ | Alpha and beta proteins (a/b) | Arginase/deacetylase | Arginase/deacetylase | automated matches | automated matches | (Thermoplasma volcanium GSS1 ) [TaxId: 273116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Arginase-like amidino hydrolases | 8073472 | 4000424 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Arginase/deacetylase-like | 8073473 | 3000260 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Arginase/deacetylase-like | 8073473 | 3000260 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Arginase/deacetylase-like | 8073473 | 3000260 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Arginase | e3pzlA1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: Arginase/deacetylase | F: Arginase | ECOD (1.6) |
B | Arginase | e3pzlB1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: Arginase/deacetylase | F: Arginase | ECOD (1.6) |
C | Arginase | e3pzlC1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: Arginase/deacetylase | F: Arginase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.800.10 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
B | 3.40.800.10 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
C | 3.40.800.10 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00491 | Arginase family (Arginase) | Arginase family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005925 | Agmatinase-related | Family | |
IPR020855 | Ureohydrolase, manganese-binding site | Binding Site | |
IPR023696 | Ureohydrolase domain superfamily | Homologous Superfamily | |
IPR006035 | Ureohydrolase | Family |