Skip to main content

 3PQU | pdb_00003pqu

The crystal structures of porcine pathogen AsH57_TbpB

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8052217 3002098 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052219 3002099 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8047029 3002098 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052218 3002099 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052219 3002099 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTbpB N-lobe and C-lobe handle domains-like 8052218 3002099 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8052217 3002098 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTbpB N-lobe and C-lobe beta-barrel domains-like 8047029 3002098 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BBONe3pquB1 A: alpha arraysX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: BONECOD (v295.2)
ABONe3pquA1 A: alpha arraysX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: BONECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.128.250 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
B2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)
B2.40.128.240 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
A2.40.128.250 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
A2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)
A2.40.128.240 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Transferrin binding protein B- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR001677Transferrin-binding protein B, C-lobe/N-lobe beta-barrel domainDomain
A, B
IPR011250Outer membrane protein/outer membrane enzyme PagP-like, beta-barrel superfamilyHomologous Superfamily
A, B
IPR035313Transferrin-binding protein B, N-lobe handleDomain
A, B
IPR038669TbpB, N-lobe handle domain superfamilyHomologous Superfamily
A, B
IPR038197TbpB, C-lobe handle domain superfamilyHomologous Superfamily
A, B
IPR035316Transferrin-binding protein B, C-lobe handle domainDomain