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 3PN6 | pdb_00003pn6

Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) G41M mutant

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyPeptide deformylase 8074782 3001229 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPeptide deformylase 8074782 3001229 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BYjeF_Ne3pn6B1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: YjeF_NECOD (v295.2)
AYjeF_Ne3pn6A1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: YjeF_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.90.45.10 Alpha Beta Alpha-Beta Complex Peptide Deformylase Peptide deformylaseCATH (4.3.0)
A3.90.45.10 Alpha Beta Alpha-Beta Complex Peptide Deformylase Peptide deformylaseCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01327Polypeptide deformylase (Pep_deformylase)Polypeptide deformylaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Peptide deformylase 1B, chloroplastic -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR023635Peptide deformylaseFamily
A, B
IPR036821Peptide deformylase superfamilyHomologous Superfamily