3PMR
Crystal Structure of E2 domain of Human Amyloid Precursor-Like Protein 1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3pmra_ | All alpha proteins | STAT-like | CAPPD, an extracellular domain of amyloid beta A4 protein | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d3pmrb_ | All alpha proteins | STAT-like | CAPPD, an extracellular domain of amyloid beta A4 protein | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | CAPPD-like | 8072399 | 3001286 | SCOP2B (2022-06-29) |
B | SCOP2 Family | CAPPD, an extracellular domain of amyloid beta A4 protein | 8072398 | 4002465 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | CAPPD-like | 8072399 | 3001286 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF12925 | e3pmrA4 | A: alpha bundles | X: STAT-like | H: CAPPD, an extracellular domain of amyloid beta A4 protein (From Topology) | T: CAPPD, an extracellular domain of amyloid beta A4 protein | F: PF12925 | ECOD (1.6) |
B | PF12925 | e3pmrB3 | A: alpha bundles | X: STAT-like | H: CAPPD, an extracellular domain of amyloid beta A4 protein (From Topology) | T: CAPPD, an extracellular domain of amyloid beta A4 protein | F: PF12925 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.770 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Amyloid precursor protein, E2 domain | CATH (4.3.0) |
B | 1.20.120.770 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Amyloid precursor protein, E2 domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019744 | Amyloidogenic glycoprotein, copper-binding domain conserved site | Conserved Site | |
IPR019745 | Amyloidogenic glycoprotein, intracellular domain, conserved site | Conserved Site | |
IPR011178 | Amyloidogenic glycoprotein, copper-binding | Domain | |
IPR008154 | Amyloidogenic glycoprotein, extracellular | Domain | |
IPR015849 | Amyloidogenic glycoprotein, heparin-binding | Domain | |
IPR019543 | Beta-amyloid precursor protein C-terminal | Domain | |
IPR036176 | E2 domain superfamily | Homologous Superfamily | |
IPR036454 | Amyloidogenic glycoprotein, heparin-binding domain superfamily | Homologous Superfamily | |
IPR024329 | Amyloidogenic glycoprotein, E2 domain | Domain | |
IPR036669 | Amyloidogenic glycoprotein, copper-binding domain superfamily | Homologous Superfamily | |
IPR008155 | Amyloidogenic glycoprotein | Family |