3PDM | pdb_00003pdm

Hibiscus Latent Singapore virus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth P]SCOP2 FamilyTMV-like viral coat proteins 8071744 4000823 SCOP2 (2022-06-29)
B [auth P]SCOP2 SuperfamilyTMV-like viral coat proteins 8071745 3001587 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth P]Neur_chan_LBDe3pdmP1 A: alpha bundlesX: N-terminal beta-sandwich domain in anthrax protective antigenH: Macro domain-likeT: Macro domain-likeF: Neur_chan_LBDECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth P]1.20.120.70 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Tobacco mosaic virus-like, coat proteinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth P]PF00721Virus coat protein (TMV like) (TMV_coat)Virus coat protein (TMV like)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth P]Coat protein -
A [auth R]RNA (5'-R(P*GP*AP*A)-3')---