3PBP
Structure of the yeast heterotrimeric Nup82-Nup159-Nup116 nucleoporin complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
K | SCOP2B Superfamily | ZU5 domain-like | 8101593 | 3002026 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ZU5 domain-like | 8101593 | 3002026 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ZU5 domain-like | 8101593 | 3002026 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | ZU5 domain-like | 8101593 | 3002026 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e3pbpA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e3pbpD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e3pbpG1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
J | F_UNCLASSIFIED | e3pbpJ1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: F_UNCLASSIFIED | ECOD (1.6) |
K | PF04096 | e3pbpK1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
B | PF04096 | e3pbpB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
E | PF04096 | e3pbpE1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
H | PF04096 | e3pbpH1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: PF04096 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
K | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
B | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
E | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
H | 3.30.1610.10 | Alpha Beta | 2-Layer Sandwich | c-terminal autoproteolytic domain of nucleoporin nup98 | Peptidase S59, nucleoporin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037700 | Nucleoporin NUP88/NUP82 | Family | |
IPR025574 | Nucleoporin FG repeat | Repeat | |
IPR037665 | Nucleoporin peptidase S59-like | Family | |
IPR036903 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily | Homologous Superfamily | |
IPR007230 | Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain | Domain | |
IPR039462 | Nucleoporin Nup159/Nup146, N-terminal | Domain | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |