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Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212 External Resource: Annotation Chains Domain Info Class Fold Superfamily Family Domain Species Provenance Source (Version) H d3ogoh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Camelus dromedarius ) [TaxId: 9838 ], SCOPe (2.08) H d3ogoh2 Artifacts Tags Tags Tags C-terminal Tags Camelus dromedarius ) [TaxId: 9838 ], SCOPe (2.08) G d3ogog_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Camelus dromedarius ) [TaxId: 9838 ], SCOPe (2.08) F d3ogof_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Camelus dromedarius ) [TaxId: 9838 ], SCOPe (2.08) E d3ogoe_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Camelus dromedarius ) [TaxId: 9838 ], SCOPe (2.08) D d3ogod_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins Green fluorescent protein, GFP Jellyfish (Aequorea victoria ) [TaxId: 6100 ], SCOPe (2.08) C d3ogoc_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins Green fluorescent protein, GFP Jellyfish (Aequorea victoria ) [TaxId: 6100 ], SCOPe (2.08) B d3ogob_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins Green fluorescent protein, GFP Jellyfish (Aequorea victoria ) [TaxId: 6100 ], SCOPe (2.08) A d3ogoa_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins Green fluorescent protein, GFP Jellyfish (Aequorea victoria ) [TaxId: 6100 ], SCOPe (2.08)
Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) D SCOP2B Superfamily GFP-like 8096046 3000576 SCOP2B (2022-06-29) C SCOP2B Superfamily GFP-like 8096046 3000576 SCOP2B (2022-06-29) B SCOP2B Superfamily GFP-like 8096046 3000576 SCOP2B (2022-06-29) A SCOP2B Superfamily GFP-like 8096046 3000576 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) H Sdh_cyt e3ogoH1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) G Sdh_cyt e3ogoG1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) F Sdh_cyt e3ogoF1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) E Sdh_cyt e3ogoE1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) D Sdh_cyt e3ogoD1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) C Sdh_cyt e3ogoC1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) B Sdh_cyt e3ogoB1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2) A Sdh_cyt e3ogoA1 A: alpha arrays X: Alpha-beta plaits H: Phage tail protein-like T: Transmembrane protein 14A F: Sdh_cyt ECOD (v295.2)
Chain Protein Name Description Organism Name Gene Allele Name(s) Domain Name(s) Receptor Type Receptor Description Provenance Source GFP-nanobody VH Camelus dromedarius (Arabian camel) IGHV3S26*01, IGHV3S51*01, IGHJ5*01 V-DOMAIN VH IG (VH) IMGT (202636-0)
Chain Chain Class Chain Subclass Chain Type Antigen Name(s) Provenance Source Heavy Chain IGHV1 - green fluorescent protein SAbDab (2026-09-18)
Chains Polymer Molecular Function Biological Process Cellular Component GFP-nanobody - - - Green fluorescent protein - -