3ODI
Crystal structure of cyclophilin A in complex with Voclosporin E-ISA247
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
K | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
M | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
O | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
Q | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
S | SCOP2B Superfamily | Cyclophilin-like | 8043341 | 3000168 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00160 | e3odiA1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
C | PF00160 | e3odiC1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
E | PF00160 | e3odiE1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
G | PF00160 | e3odiG1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
I | PF00160 | e3odiI1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
K | PF00160 | e3odiK1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
M | PF00160 | e3odiM1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
O | PF00160 | e3odiO1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
Q | PF00160 | e3odiQ1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
S | PF00160 | e3odiS1 | A: beta barrels | X: Cyclophilin-like (From Topology) | H: Cyclophilin-like (From Topology) | T: Cyclophilin-like | F: PF00160 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
C | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
E | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
G | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
I | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
K | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
M | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
O | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
Q | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
S | 2.40.100.10 | Mainly Beta | Beta Barrel | Cyclophilin | Cyclophilin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029000 | Cyclophilin-like domain superfamily | Homologous Superfamily | |
IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Domain | |
IPR024936 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase | Family | |
IPR020892 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Conserved Site |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
ABA | Parent Component: ALA :  AA0253 , AA0409 :  S-(2-aminovinyl)-3-methyl-D-cysteine MOD:00258 , L-2-aminobutanoic acid (Glu) MOD:00819 | |
DAL | AA0253 , AA0409 , AA0111 , AA0191 :  S-(2-aminovinyl)-3-methyl-D-cysteine MOD:00258 , L-2-aminobutanoic acid (Glu) MOD:00819 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 | :  |
MLE | Parent Component: LEU :  AA0253 , AA0409 , AA0111 , AA0191 , AA0337 :  S-(2-aminovinyl)-3-methyl-D-cysteine MOD:00258 , L-2-aminobutanoic acid (Glu) MOD:00819 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , N-methyl-L-leucine MOD:00342 | |
MVA | Parent Component: VAL :  AA0253 , AA0409 , AA0111 , AA0191 , AA0337 | |
SAR | Parent Component: GLY :  AA0253 , AA0409 , AA0111 , AA0191 , AA0337 , AA0063 :  S-(2-aminovinyl)-3-methyl-D-cysteine MOD:00258 , L-2-aminobutanoic acid (Glu) MOD:00819 , meso-lanthionine MOD:00120 , D-alanine (Ala) MOD:00198 , D-alanine (Ser) MOD:00858 , D-alanine MOD:00862 , N-methyl-L-leucine MOD:00342 , N-methylglycine MOD:00072 | |
XXA | AA0253 , AA0409 , AA0111 , AA0191 , AA0337 , AA0063 | :