3NZJ
Crystal structure of yeast 20S proteasome in complex with ligand 2a
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064020 | 3000131 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064020 | 3000131 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079504 | 3000131 | SCOP2B (2022-06-29) |
Y | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079504 | 3000131 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064048 | 3000131 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064048 | 3000131 | SCOP2B (2022-06-29) |
BA [auth 2] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036787 | 3000131 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036787 | 3000131 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064012 | 3000131 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064012 | 3000131 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064026 | 3000131 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064026 | 3000131 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064066 | 3000131 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064066 | 3000131 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079169 | 3000131 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079169 | 3000131 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036842 | 3000131 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036842 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00227,PF10584 | e3nzjB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
P | PF00227,PF10584 | e3nzjP1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
K | PF00227 | e3nzjK1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Y | PF00227 | e3nzjY1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
L | PF00227 | e3nzjL1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Z | PF00227 | e3nzjZ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
A | PF00227,PF10584 | e3nzjA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
O | PF00227,PF10584 | e3nzjO1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
J | PF00227 | e3nzjJ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
X | PF00227 | e3nzjX1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
AA [auth 1] | PF00227 | e3nzj11 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
M | PF00227 | e3nzjM1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
C | PF00227,PF10584 | e3nzjC1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Q | PF00227,PF10584 | e3nzjQ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
D | PF00227,PF10584 | e3nzjD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
R | PF00227,PF10584 | e3nzjR1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
E | PF00227,PF10584 | e3nzjE1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
S | PF00227,PF10584 | e3nzjS1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
F | PF00227,PF10584 | e3nzjF1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
T | PF00227,PF10584 | e3nzjT1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
G | PF00227,PF10584 | e3nzjG1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
U | PF00227,PF10584 | e3nzjU1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
H | PF00227,PF12465 | e3nzjH1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
V | PF00227,PF12465 | e3nzjV1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
I | PF00227 | e3nzjI1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
W | PF00227 | e3nzjW1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
BA [auth 2], N | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family | |
PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain | |
PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
CA [auth 3], DA [auth 4] | ABN | |
CA [auth 3], DA [auth 4] | BOC | |
CA [auth 3], DA [auth 4] | TRO | Parent Component: TRP :  AA0542 , AA0543 :  2'-hydroxy-L-tryptophan MOD:01816 , oxidation of tryptophan to 2'-oxo-L-tryptophan MOD:01817 |
CA [auth 3], DA [auth 4] | TY5 | Parent Component: TYR :  AA0542 , AA0543 |