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 3NND | pdb_00003nnd

The crystal structure of ABC transporter from Rhodopseudomonas palustris

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd3nndd_ Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)
Cd3nndc_ Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)
B [auth A]d3nnda1 Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)
B [auth A]d3nnda2 Artifacts Tags Tags Tags C-terminal Tags (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)
A [auth B]d3nndb_ Alpha and beta proteins (a/b) Periplasmic binding protein-like I Periplasmic binding protein-like I automated matches automated matches (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPentaxine3nndD1 A: alpha arraysX: Alpha-beta plaitsH: Protease propeptides/inhibitorsT: Protease propeptides/inhibitorsF: PentaxinECOD (v295.2)
CBONe3nndC1 A: alpha arraysX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: BONECOD (v295.2)
B [auth A]Peptidase_M28e3nndA1 A: alpha arraysX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Peptidase_M28ECOD (v295.2)
A [auth B]BONe3nndB1 A: alpha arraysX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: BONECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
C3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
B [auth A]3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)
A [auth B]3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth A],
C,
D		IPR051010Branched-chain amino acid transport proteinFamily
A [auth B],
B [auth A],
C,
D		IPR028081Leucine-binding protein domainDomain
A [auth B],
B [auth A],
C,
D		IPR028082Periplasmic binding protein-like IHomologous Superfamily