Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APentapeptide_4e3nawA2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
ASopA_Ce3nawA1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)
BPentapeptide_4e3nawB2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
BSopA_Ce3nawB1 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13979SopA-like catalytic domain (SopA_C)SopA-like catalytic domainThis domain is found in the E. coli Type III secretion effector proteins SopA and NleL [1,2]. These proteins have been shown to act as E3 ubiquitin ligase enzymes. This domain contains the active site cysteine residue.Domain
A, B
PF13981SopA-like central domain (SopA)SopA-like central domainThis domain is found in the E. coli Type III secretion effector proteins SopA and NleL [1,2]. These proteins have been shown to act as E3 ubiquitin ligase enzymes.Domain
A, B
PF13599Pentapeptide repeats (9 copies) (Pentapeptide_4)Pentapeptide repeats (9 copies)- Repeat