3MZL
Sec13/Sec31 edge element, loop deletion mutant
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054126 | 3002276 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054126 | 3002276 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054126 | 3002276 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Coat and nuclear envelope proteins | 8054126 | 3002276 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ANAPC4_WD40_19 | e3mzlA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_19 | ECOD (1.6) |
C | ANAPC4_WD40_19 | e3mzlC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_19 | ECOD (1.6) |
E | ANAPC4_WD40_19 | e3mzlE1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_19 | ECOD (1.6) |
G | ANAPC4_WD40_19 | e3mzlG1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_19 | ECOD (1.6) |
B | Sec16_C_1 | e3mzlB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: Sec16_C_1 | ECOD (1.6) |
D | Sec16_C_1 | e3mzlD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: Sec16_C_1 | ECOD (1.6) |
F | Sec16_C_1 | e3mzlF1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: Sec16_C_1 | ECOD (1.6) |
H | Sec16_C_1 | e3mzlH1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain (From Topology) | T: Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | F: Sec16_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
PF12931 | Sec23-binding domain of Sec16 (Sec16_C) | Sec23-binding domain of Sec16 | Sec16 is a multi-domain vesicle coat protein. The C-terminal region is the part that binds to Sec23, a COPII vesicle coat protein. This association is part of the transport vesicle coat structure [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR037363 | Sec13/Seh1 family | Family | |
IPR001680 | WD40 repeat | Repeat | |
IPR021614 | Protein transport protein SEC31 | Family | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR040251 | Protein transport protein SEC31-like | Family | |
IPR009917 | SRA1/Sec31 | Domain | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR001680 | WD40 repeat | Repeat | |
IPR024298 | Ancestral coatomer element 1, Sec16/Sec31 | Domain | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |