3LN1
Structure of celecoxib bound at the COX-2 active site
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Heme-dependent peroxidases | 8038293 | 3000844 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | EGF/Laminin-like | 8038309 | 3000412 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | An_peroxidase | e3ln1A1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: An_peroxidase | ECOD (1.6) |
A | hEGF_4 | e3ln1A2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
B | An_peroxidase | e3ln1B1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: An_peroxidase | ECOD (1.6) |
B | hEGF_4 | e3ln1B2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
C | An_peroxidase | e3ln1C1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: An_peroxidase | ECOD (1.6) |
C | hEGF_4 | e3ln1C2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
D | An_peroxidase | e3ln1D1 | A: alpha complex topology | X: Heme-dependent peroxidases (From Topology) | H: Heme-dependent peroxidases (From Topology) | T: Heme-dependent peroxidases | F: An_peroxidase | ECOD (1.6) |
D | hEGF_4 | e3ln1D2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
B | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
B | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
C | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
C | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
D | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
D | 1.10.640.10 | Mainly Alpha | Orthogonal Bundle | Myeloperoxidase, subunit C | Haem peroxidase domain superfamily, animal type | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00008 | EGF-like domain (EGF) | EGF-like domain | There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... | Domain | |
PF03098 | Animal haem peroxidase (An_peroxidase) | Animal haem peroxidase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019791 | Haem peroxidase, animal-type | Family | |
IPR050783 | Oxylipin biosynthesis and metabolism | Family | |
IPR037120 | Haem peroxidase domain superfamily, animal type | Homologous Superfamily | |
IPR010255 | Haem peroxidase superfamily | Homologous Superfamily | |
IPR000742 | EGF-like domain | Domain |