3L88
Crystal structure of the human Adenovirus type 21 fiber knob
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Virus attachment protein globular domain | 8071495 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00541 | e3l88A1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
B | PF00541 | e3l88B1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
C | PF00541 | e3l88C1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
D | PF00541 | e3l88D1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
E | PF00541 | e3l88E1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
F | PF00541 | e3l88F1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
G | PF00541 | e3l88G1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
H | PF00541 | e3l88H1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
I | PF00541 | e3l88I1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
J | PF00541 | e3l88J1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
K | PF00541 | e3l88K1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
L | PF00541 | e3l88L1 | A: beta sandwiches | X: Domain in virus attachment proteins (From Topology) | H: Domain in virus attachment proteins (From Topology) | T: Domain in virus attachment proteins | F: PF00541 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00541 | Adenoviral fibre protein (knob domain) (Adeno_knob) | Adenoviral fibre protein (knob domain) | Specific attachment of adenovirus is achieved through interactions between host-cell receptors and the adenovirus fibre protein and is mediated by the globular carboxy-terminal domain of the adenovirus fibre protein, termed the carboxy-terminal kn ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
IPR000978 | Adenoviral fibre protein, knob | Domain | |
IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
IPR000931 | Adenovirus fibre protein | Family | |
IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |