3L49 | pdb_00003l49

CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d3l49d1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like I	Periplasmic binding protein-like I	automated matches	automated matches	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
D	d3l49d2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
C	d3l49c1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like I	Periplasmic binding protein-like I	automated matches	automated matches	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
C	d3l49c2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
B	d3l49b1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like I	Periplasmic binding protein-like I	automated matches	automated matches	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
B	d3l49b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
A	d3l49a1	Alpha and beta proteins (a/b)	Periplasmic binding protein-like I	Periplasmic binding protein-like I	automated matches	automated matches	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)
A	d3l49a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Cereibacter sphaeroides 2.4.1 ) [TaxId: 272943 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Peripla_BP_3	e3l49D2	A: alpha arrays	X: DEATH domain	H: PH domain-like	T: PH domain-like	F: Peripla_BP_3	ECOD (v295.2)
D	ThiF	e3l49D1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ThiF	ECOD (v295.2)
C	Peripla_BP_3	e3l49C2	A: alpha arrays	X: DEATH domain	H: PH domain-like	T: PH domain-like	F: Peripla_BP_3	ECOD (v295.2)
C	ThiF	e3l49C3	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ThiF	ECOD (v295.2)
B	Peripla_BP_3	e3l49B2	A: alpha arrays	X: DEATH domain	H: PH domain-like	T: PH domain-like	F: Peripla_BP_3	ECOD (v295.2)
B	ThiF	e3l49B3	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ThiF	ECOD (v295.2)
A	Peripla_BP_3	e3l49A2	A: alpha arrays	X: DEATH domain	H: PH domain-like	T: PH domain-like	F: Peripla_BP_3	ECOD (v295.2)
A	ThiF	e3l49A1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: ThiF	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
C	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
B	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
A	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF13407	Periplasmic binding protein domain (Peripla_BP_4)	Periplasmic binding protein domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit	binding carbohydrate binding	-	cellular anatomical structure cell envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR025997	Periplasmic binding protein	Domain
A, B, C, D	IPR028082	Periplasmic binding protein-like I	Homologous Superfamily