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Crystal structure of Mycoplasma arthritidis-derived mitogen External Resource: Annotation Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2B Superfamily Superantigen MAM 8042683 3001107 SCOP2B (2022-06-29) B SCOP2B Superfamily Superantigen MAM 8042683 3001107 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A PF09245 e3kphA1 A: alpha arrays X: Superantigen MAM C-terminal domain (From Topology) H: Superantigen MAM C-terminal domain (From Topology) T: Superantigen MAM C-terminal domain F: PF09245 ECOD (1.6) A PF09245 e3kphA2 A: alpha bundles X: N-cbl like H: Superantigen MAM N-terminal domain (From Topology) T: Superantigen MAM N-terminal domain F: PF09245 ECOD (1.6) B PF09245 e3kphB1 A: alpha arrays X: Superantigen MAM C-terminal domain (From Topology) H: Superantigen MAM C-terminal domain (From Topology) T: Superantigen MAM C-terminal domain F: PF09245 ECOD (1.6) B PF09245 e3kphB2 A: alpha bundles X: N-cbl like H: Superantigen MAM N-terminal domain (From Topology) T: Superantigen MAM N-terminal domain F: PF09245 ECOD (1.6)
Chain Domain Class Architecture Topology Homology Provenance Source (Version) A 1.20.120.390 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 CATH (4.3.0) A 1.10.10.530 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A mam-mhc complex, Chain D, Domain 2 CATH (4.3.0) B 1.20.120.390 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 CATH (4.3.0) B 1.10.10.530 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A mam-mhc complex, Chain D, Domain 2 CATH (4.3.0)
Chains Accession Name Description Comments Source PF09245 Mycoplasma arthritidis-derived mitogen (MA-Mit) Mycoplasma arthritidis-derived mitogen Mycoplasma arthritidis-derived mitogen (MA-Mit) adopts a completely alpha-helical structure consisting of ten alpha helices. It is a superantigen that can activate large fractions of T cells bearing particular TCR V-beta elements. Two MA-Mit molecule ... Mycoplasma arthritidis-derived mitogen (MA-Mit) adopts a completely alpha-helical structure consisting of ten alpha helices. It is a superantigen that can activate large fractions of T cells bearing particular TCR V-beta elements. Two MA-Mit molecules form an asymmetric dimer and cross-link two MHC antigens to form a dimerised MA-Mit-MHC complex [1]. Less Domain