Annotations: 3KDE

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Bac_rhodopsin	e3kdeC1	A: beta barrels	X: Cystatin-like	H: NTF2-like	T: NTF2-like	F: Bac_rhodopsin	ECOD (v294.2)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	6.20.210.20	Special	Other non-globular	Herpes Virus-1	THAP domain	CATH (4.3.0)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	Transposable element P transposase	DNA binding sequence-specific DNA binding P-element binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding transferase activity DNA binding sequence-specific DNA binding P-element binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding transferase activity catalytic activity transposase activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid	nucleobase-containing compound metabolic process DNA recombination cellular process metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process transposition DNA transposition nucleic acid metabolic process DNA integration	-
B	5'-D((BRU)PCPCPAPCPTPTPAPAPC)-3'	-	-	-
A	5'-D(GPTPTPAPAPGP(BRU)PGPGPA)-3'	-	-	-

Chains	Accession	Name	Type
C	IPR006612	THAP-type zinc finger	Domain
C	IPR022242	Transposable element P transposase-like, C-terminal	Domain
C	IPR048366	Transposable element P transposase-like, GTP-binding insertion domain	Domain
C	IPR048367	Transposable element P transposase-like, RNase H, C-terminal domain	Domain
C	IPR038441	THAP-type zinc finger superfamily	Homologous Superfamily
C	IPR048365	Transposable element P transposase-like, RNase H domain, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3KDE | pdb_00003kde