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 3KCS | pdb_00003kcs

Crystal structure of PAmCherry1 in the dark state

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3kcsa_ Alpha and beta proteins (a+b) GFP-like GFP-like Fluorescent proteins automated matches (Discosoma sp. ) [TaxId: 86600 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyFluorescent proteins 8081042 4001049 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGFP-like 8081043 3000576 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AATP-synt_ab_Ne3kcsA1 A: alpha arraysX: Alpha-beta plaitsH: Phage tail protein-likeT: Transmembrane protein 14AF: ATP-synt_ab_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PAmCherry1 protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000786Green fluorescent protein, GFPFamily
IPR011584Green fluorescent protein-relatedFamily
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
NRQ Parent Component: MET, TYR, GLY

:  AA0379

:  2-imino-methionine 5-imidazolinone glycine MOD:00384