3K50
Crystal structure of Putative S41 protease (YP_211611.1) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PDZ_2 | e3k50A1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
A | Peptidase_S41_CPP_like | e3k50A3 | A: alpha bundles | X: Tail specific protease helical domain (From Topology) | H: Tail specific protease helical domain (From Topology) | T: Tail specific protease helical domain | F: Peptidase_S41_CPP_like | ECOD (1.6) |
A | Peptidase_S41 | e3k50A2 | A: a/b three-layered sandwiches | X: ClpP/crotonase (From Topology) | H: ClpP/crotonase (From Topology) | T: ClpP/crotonase | F: Peptidase_S41 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.750.170 | Alpha Beta | 2-Layer Sandwich | Transcription Regulator spoIIAA | CATH (4.3.0) | |
A | 2.30.42.10 | Mainly Beta | Roll | Pdz3 Domain | PDZ domain | CATH (4.3.0) |
A | 3.90.226.10 | Alpha Beta | Alpha-Beta Complex | 2-enoyl-CoA Hydratase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18294 | Peptidase S41 N-terminal domain (Pept_S41_N) | Peptidase S41 N-terminal domain | This domain is found in the N-terminal region of proteins carrying the peptidase S41 domain (Pfam: PF03572) in Bacteroidetes. | Domain | |
PF03572 | Peptidase family S41 (Peptidase_S41) | Peptidase family S41 | - | Family | |
PF17820 | PDZ domain (PDZ_6) | PDZ domain | This entry represents the PDZ domain from a wide variety of proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Putative S41 protease |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005151 | Tail specific protease | Domain | |
IPR029045 | ClpP/crotonase-like domain superfamily | Homologous Superfamily | |
IPR041489 | PDZ domain 6 | Domain | |
IPR001478 | PDZ domain | Domain | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR041613 | Peptidase S41, N-terminal | Domain |