3K1Q

Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF06016e3k1qA16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF06016ECOD (1.6)
APF21060e3k1qA15 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF21060ECOD (1.6)
APF21061e3k1qA13 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF21061ECOD (1.6)
APF21062,PF21065e3k1qA11 A: a+b two layersX: ferredoxin-like domain in VP1 (From Topology)H: ferredoxin-like domain in VP1 (From Topology)T: ferredoxin-like domain in VP1F: PF21062,PF21065ECOD (1.6)
APF21063e3k1qA9 A: a+b three layersX: HIT-likeH: HIT-related (From Topology)T: HIT-relatedF: PF21063ECOD (1.6)
APF21064e3k1qA14 A: a+b complex topologyX: Rotavirus NSP2 fragment, N-terminal domain (From Topology)H: Rotavirus NSP2 fragment, N-terminal domain (From Topology)T: Rotavirus NSP2 fragment, N-terminal domainF: PF21064ECOD (1.6)
APF21065e3k1qA12 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: PF21065ECOD (1.6)
APF21066e3k1qA10 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: PF21066ECOD (1.6)
BPF22033e3k1qB2 A: a+b complex topologyX: Inner layer core protein p3-related (From Topology)H: Inner layer core protein p3-related (From Topology)T: Inner layer core protein p3-relatedF: PF22033ECOD (1.6)
CPF22033e3k1qC1 A: a+b complex topologyX: Inner layer core protein p3-related (From Topology)H: Inner layer core protein p3-related (From Topology)T: Inner layer core protein p3-relatedF: PF22033ECOD (1.6)
CPF13912e3k1qC2 A: few secondary structure elementsX: beta-beta-alpha zinc fingersH: beta-beta-alpha zinc fingers (From Topology)T: beta-beta-alpha zinc fingersF: PF13912ECOD (1.6)
DPF03084e3k1qD1 A: alpha complex topologyX: Core protein VP6 (From Topology)H: Core protein VP6 (From Topology)T: Core protein VP6F: PF03084ECOD (1.6)
EPF03084e3k1qE1 A: alpha complex topologyX: Core protein VP6 (From Topology)H: Core protein VP6 (From Topology)T: Core protein VP6F: PF03084ECOD (1.6)
FPF17071e3k1qF1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
GPF17071e3k1qG1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
HPF17071e3k1qH1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
LPF17071e3k1qL1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
MPF17071e3k1qM1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
NPF17071e3k1qN1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
RPF17071e3k1qR1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
SPF17071e3k1qS1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
TPF17071e3k1qT1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
YPF17071e3k1qY1 A: a+b complex topologyX: Outer capsid protein sigma 3-related (From Topology)H: Outer capsid protein sigma 3-related (From Topology)T: Outer capsid protein sigma 3-relatedF: PF17071ECOD (1.6)
IPF05993e3k1qI2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
IPF05993e3k1qI3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
IPF05993e3k1qI1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
JPF05993e3k1qJ2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
JPF05993e3k1qJ3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
JPF05993e3k1qJ1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
KPF05993e3k1qK2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
KPF05993e3k1qK3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
KPF05993e3k1qK1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
OPF05993e3k1qO2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
OPF05993e3k1qO3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
OPF05993e3k1qO1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
PPF05993e3k1qP2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
PPF05993e3k1qP3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
PPF05993e3k1qP1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
QPF05993e3k1qQ2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
QPF05993e3k1qQ3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
QPF05993e3k1qQ1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
UPF05993e3k1qU2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
UPF05993e3k1qU3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
UPF05993e3k1qU1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
VPF05993e3k1qV2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
VPF05993e3k1qV3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
VPF05993e3k1qV1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
WPF05993e3k1qW2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
WPF05993e3k1qW3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
WPF05993e3k1qW1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
XPF05993e3k1qX2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
XPF05993e3k1qX3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: PF05993ECOD (1.6)
XPF05993e3k1qX1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: PF05993ECOD (1.6)